PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027073407.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TCP | ||||||||
Protein Properties | Length: 407aa MW: 44350.9 Da PI: 7.0937 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 99.7 | 5.1e-31 | 63 | 187 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 g+kdrhsk++T +g+RdRRvRls+++a +++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ s+ + + + +++++ g XP_027073407.1 63 FGGKDRHSKVCTVRGLRDRRVRLSVPTAVQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLQMPPGSFNHSFQPVWATHHPVVGahqvtkdq 157 689*************************************************************7777644433444444443333333333334 PP TCP 89 .............kaaksaakskksqksaa 105 ++ +s+++++k+ +s+a XP_027073407.1 158 glrigasinwgdhDHHPSEPSGSKTWDSDA 187 455555555555533333333333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence |
MIAREIDAAA DVTAKQEGNT ATDEKTSNYK ASISGTSAAA ASSSSSSWSR LKDPRIVRVS 60 RAFGGKDRHS KVCTVRGLRD RRVRLSVPTA VQLYDLQDRL GLSQPSKVVD WLLNAAKHEI 120 DELPPLQMPP GSFNHSFQPV WATHHPVVGA HQVTKDQGLR IGASINWGDH DHHPSEPSGS 180 KTWDSDAILR PKSKELIARS GDSSEDKETW TRSSEEGKQH SNNYESTSHG AAYFSSNNFF 240 SRLGHSTSPS LGLLNSTVLP YNSLIRWDPS NLSLSQSGSP SGLTPVPQPE DFHNFSVVPL 300 PSTMSVPSGG PQVLVYQPAS SITQSYFPSH IAPPVTVDYA QKQIEFQMLN STTENPLTSS 360 LAPPVSDSTS QHAAGRPFRI LSTTTNLLPS QNDRESKQDL DNDFSSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 7e-44 | TCP family protein |