PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027073085.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 437aa MW: 47268.7 Da PI: 8.3019

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027073085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.8	2.6e-14	351	404	5	58
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +r+rr++kNRe+A rsR+RK+a++ eLe + +L++eN Lk+ l el+ + + XP_027073085.1 351 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENGHLKQALAELERKRRQ 404 79*********************************************9987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MVVTDSEMTS HGNKVESPPL QSEQQQPKNH AFASLGSQSS IYSLTLDEFQ NTLCESGKNF 60 GSMNMDEFLN SIWTAEENQA QVTSAMVVAA ANTNPNPKQL SQLGEANDAP IDQKGIITRQ 120 LSLPRQGSLT LPGPLSRKTV EEVWTEIHES QQEHEPPTNC TNPQNTGSSQ QRQITFGEMT 180 LEDFLVRAGV VREQTQPPPS PLPQQPQQPY GGTFYQNNNT NVMGTGFVTR PVIGGPGGSA 240 NVVGYQPMPQ TGDASAAYPG SMKRGGGYAA QPTAACFGGR MGNGGSGGGY GQVQGLGMGS 300 PVSPVSSEGL CANPMDGANP YGMDVGGMIG SGAGGGRKRI IDGPIEKVVE RRQRRMIKNR 360 ESAARSRARK QAYTVELEAE LNQLKEENGH LKQALAELER KRRQQQVEES KMKAQTRTQR 420 NNDRLMRTIR RTTSSPF

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MVVTDSEMTS HGNKVESPPL QSEQQQPKNH AFASLGSQSS IYSLTLDEFQ NTLCESGKNF  60
GSMNMDEFLN SIWTAEENQA QVTSAMVVAA ANTNPNPKQL SQLGEANDAP IDQKGIITRQ  120
LSLPRQGSLT LPGPLSRKTV EEVWTEIHES QQEHEPPTNC TNPQNTGSSQ QRQITFGEMT  180
LEDFLVRAGV VREQTQPPPS PLPQQPQQPY GGTFYQNNNT NVMGTGFVTR PVIGGPGGSA  240
NVVGYQPMPQ TGDASAAYPG SMKRGGGYAA QPTAACFGGR MGNGGSGGGY GQVQGLGMGS  300
PVSPVSSEGL CANPMDGANP YGMDVGGMIG SGAGGGRKRI IDGPIEKVVE RRQRRMIKNR  360
ESAARSRARK QAYTVELEAE LNQLKEENGH LKQALAELER KRRQQQVEES KMKAQTRTQR  420
NNDRLMRTIR RTTSSPF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	399	404	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	5e-92	bZIP family protein