PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027073001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TCP | ||||||||
Protein Properties | Length: 230aa MW: 24723.9 Da PI: 6.9614 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 109.4 | 5.3e-34 | 67 | 134 | 6 | 73 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++ +++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+pa+ ++tg+++ +++ + XP_027073001.1 67 KKPKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPAVVAATGSGTFPKTMV 134 6789********************************************************76666332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MVLHPRTNGS HSQAKDNVPD PDLSATSPDL QLLSSVAAGA AADDDTANAS SLSIIEQQQP 60 EQPVPPKKPK DRHTKVNGRG RRVRMPALCA ARIFQLTREL GHRSDGETIE WLLRQAEPAV 120 VAATGSGTFP KTMVTSVGSL PTSHLSESTY ATVTRVHPSA VVIPGMGGFF AVPPPPMCRL 180 DLRQPPPTEL SGGINAYSQM PYTALLLEPS PRGEEHAESS AKNRDDFWHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 1e-36 | TCP family protein |