PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027072991.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 319aa    MW: 34712.6 Da    PI: 7.0051
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027072991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-30113166155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_027072991.1 113 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 166
                     59*******************.********************************8 PP
2Myb_DNA-binding482.8e-15115165148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_027072991.1 115 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 165
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MREDDSNWFA KWEEELPSPE ELTPLSQTLI TPDLAVYFDI RNPNSPHHHH HHQQNPPPPP  60
PPPPAPSQGQ NTPSSQPNSS AEFDSSELGG TGGGSGGAGA GSGGEEPART LKRPRLVWTP  120
QLHKRFVDAV AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQSISSGGGN  180
GGGVNGNASM AAAGSEPDLF ASTPVPPHFL HPGRPNSDHF LPFVPMTMQH HHQMATVVGH  240
HHPHPQLQQQ FRDFGTSPPN GQFEHRFLPR QSQQQVQRMG TPVHSNTPVM PSYVEDLESA  300
TAASANGRKV LTLFPTGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.12e-78G2-like family protein