PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027072975.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family S1Fa-like
Protein Properties Length: 88aa    MW: 9850.62 Da    PI: 10.2534
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027072975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA130.74.1e-412288470
            S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                    +++eakG+nPGlivll+vggl+l flvgny ly+yaqk+lPP+kkkPvskkk+k+e+lkqGv++PGe
  XP_027072975.1 22 VETEAKGFNPGLIVLLLVGGLILAFLVGNYFLYMYAQKTLPPKKKKPVSKKKMKKERLKQGVSAPGE 88
                    689***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MDYEQDFGDR VPPSFDSRNM GVETEAKGFN PGLIVLLLVG GLILAFLVGN YFLYMYAQKT  60
LPPKKKKPVS KKKMKKERLK QGVSAPGE