PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027072908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 513aa MW: 55639.3 Da PI: 6.6433 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.1 | 2.4e-25 | 207 | 262 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+ XP_027072908.1 207 DGYNWRKYGQKQVKSPQGSRSYYRCTYSECCAKK-IECSDDSNRVMEIVYRSHHNHD 262 9*******************************98.*********************7 PP | |||||||
2 | WRKY | 79.4 | 4e-25 | 379 | 432 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr CtsagCpv+k++er+++++++v+itY+g H+h+ XP_027072908.1 379 ADGYRWRKYGQKMVKGNPHPR----CTSAGCPVRKHIERAKDNTNAVIITYKGVHDHD 432 6*******************6....********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 513 aa Download sequence |
MDAKNFNSDN NSSNKSPSCE EEDEAAAQNS KSREEFDENS RGGGGDGYEQ VNSKTVDNSS 60 IPVVVAQMSN NRASSTPETL ATAASSDLHC KFEVAVDNEM QRLEPAEELK DQVGMSYQEE 120 FRIIADQAVP DQTQNQQEPP NGPRSSEPSP TSVTQPISSV PSPTLPEQKM SPGDNRNTSH 180 TSEADKKNSF DPKTLSVVSI QKTPSPDGYN WRKYGQKQVK SPQGSRSYYR CTYSECCAKK 240 IECSDDSNRV MEIVYRSHHN HDPPQKVNCT RGSRHSLSIA PANGSDSSVA PIGATADSAP 300 STSSKDSVQE KVSVPDPIQK DSSDSDDNAE TNIKQEREDE PEPSKRLKKT VASCSAPLLK 360 PGKKPKIVVH AASDVGISAD GYRWRKYGQK MVKGNPHPRC TSAGCPVRKH IERAKDNTNA 420 VIITYKGVHD HDMPVPKKRH GPPSAPLVAA AAPASMSTVQ VVKSETIQNQ VSATQWSVDK 480 EGGLKGQTLE CGGEKNVESA RTLLSIGFEI KPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-107 | WRKY family protein |