PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027072447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28237.4 Da PI: 7.4661 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.0003 | 124 | 162 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_027072447.1 124 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 162 6678889999999999998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MHAKKTLENW EEQLLQQQPP NGSNIVDHVK QENSAANGAY NMYGHENAEF HAAKTTWSQM 60 MPVSSPTSCV TTLSSNMLDF SSSKSDGRHP PPDRSSECNS TAIGGASKKA RVQPSSTQSS 120 FKVRKEKLGD RITALHQLVS PFGKTDTASV LLEAIGYIRF LQSQIEALSS PYLGSKSGNV 180 RQQQSAQGER NCLFPEDPGQ LLNDNCMKRK AASEQDSEEE VKKDLRSRGL CLVPISCTLQ 240 VGSDNGADYW APALGGGFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 2e-94 | bHLH family protein |