PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027071739.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 361aa MW: 40251.4 Da PI: 6.3907

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027071739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	31.9	3.4e-10	72	109	2	39
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 Fl k+y+i++++e++++isws++g+sf+v+d+++fa + XP_027071739.1 72 FLLKVYDIVKNPETDSIISWSSSGTSFIVWDPHRFAAE 109 9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEANSTKYEL KKGENKGERL NPIIPIGTDV SESSSNAIVT AAAAVSATPL AKEGYANAAS 60 SSSSQVRAPP PFLLKVYDIV KNPETDSIIS WSSSGTSFIV WDPHRFAAEG FRKINWDRLE 120 FQNAWFQKGK KSWLKKIKRR IQGTQNAHLC KPLGTEGQLS LSGEQKKFES LMQEHDALKV 180 EIMKLKDMEE NSVKEMEILE KQAQCITSKL QNMLKYTIHE LLIRKKKLQS NNAANEQGSG 240 GRQSIESLVE LLNEGETSHG SWKNSPRAQS GTGKTFSNVN LSTAVQEEED CTVSMGRFSD 300 FYTAVYSLLE KQLMDDISCE NVPEEERAKL QQNDVIPLED LIEGPANWNE FAKGIGNKAR 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEANSTKYEL KKGENKGERL NPIIPIGTDV SESSSNAIVT AAAAVSATPL AKEGYANAAS  60
SSSSQVRAPP PFLLKVYDIV KNPETDSIIS WSSSGTSFIV WDPHRFAAEG FRKINWDRLE  120
FQNAWFQKGK KSWLKKIKRR IQGTQNAHLC KPLGTEGQLS LSGEQKKFES LMQEHDALKV  180
EIMKLKDMEE NSVKEMEILE KQAQCITSKL QNMLKYTIHE LLIRKKKLQS NNAANEQGSG  240
GRQSIESLVE LLNEGETSHG SWKNSPRAQS GTGKTFSNVN LSTAVQEEED CTVSMGRFSD  300
FYTAVYSLLE KQLMDDISCE NVPEEERAKL QQNDVIPLED LIEGPANWNE FAKGIGNKAR  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	LKKIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	6e-17	HSF family protein