PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027071738.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 394aa    MW: 44820.5 Da    PI: 7.9929
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027071738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind27.67.7e-094380239
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
    HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39
                    Fl+k+++++ed e+k++isw+++g+s++vld+ +fa +
  XP_027071738.1 43 FLTKTFQMVEDTETKNMISWNSEGTSLIVLDHLKFAAE 80
                    9**********************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MEVRGGEIAG NGGIVRPSSL PSKQASEKIE FMKGVRGFTP PPFLTKTFQM VEDTETKNMI  60
SWNSEGTSLI VLDHLKFAAE GFKKIGLRQY EYENKWFQRG QEHLLMNIRR RNDEDPTIRK  120
RRGLRKQHVT AARPSMEAEL EIFEDHVNAL KEDITRSKYH MGKLESSIAT FKKNVKRMEA  180
KSKALIKVFA RIFSPALVEK IIQRVEKEPE LEILQTMKRR RVILPQSSKT TTKSMDDGAC  240
GMDQDDQEAN TSMAESKKSA DQNLWKKFMG DDSVSEDESE QQLLKQHSRI DMGFDDLMVS  300
KIVNAKEPNL DMEDEVVVDL WTVSLGAVSR RGEKTAVRRV DAAEFCASFG LVTGREDCAL  360
GQCLNTKLLM VFMMSTITMF DNPPVLIIHS VLQF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218222KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.12e-21HSF family protein