PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027071612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 185aa MW: 20316.7 Da PI: 4.7669 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 172.1 | 6e-54 | 40 | 135 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdr+lPianv+rimk++lPanakisk+aket+qec+sefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y+eplk yl+++relege XP_027071612.1 40 KEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDEYAEPLKRYLNRFRELEGE 134 89*******************************************************************************************99 PP NF-YB 97 k 97 + XP_027071612.1 135 R 135 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MVDSIIEGEG EGEGEGEALN KYKASVAAGC GSGDDGMAIK EQDRLLPIAN VGRIMKQILP 60 ANAKISKEAK ETMQECASEF ISFVTGEASD KCHKEKRKTV NGDDICWALG SLGFDEYAEP 120 LKRYLNRFRE LEGERANQNK SGNSEEKVMN QNLAEPRKIT THVSPTSINF NVMDESSNSL 180 SRSCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 5e-63 | NF-YB family protein |