PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027071487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 756aa MW: 85009.3 Da PI: 6.7353 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 384.3 | 1.4e-117 | 383 | 754 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++l+++cA+av+++d++ a++lL++++++asp gd +qRla++f+++L+ar+a+++s++ykal ++ts ++ l+a++l+ +P+ k+s+ XP_027071487.1 383 LRTLMIHCAQAVAADDHRSANELLKQIRQHASPFGDGNQRLAHCFAQGLEARIAGTGSQIYKALVNKRTS---AADFLKAFHLYLASCPFRKISN 474 57899***********************************************************999998...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 ++ N++I+ + +++ rvH+iDf+i +G+QWp+++q +a R++gpp++RiTg++ p++g +e+++etg+rLa++A+ ++vpfe+n+ vak++e+ XP_027071487.1 475 FASNKTIMIESKNAVRVHVIDFGILYGFQWPTFFQRIAGREGGPPKVRITGIEFPQPGfrPAERIQETGHRLAEYAKMFKVPFEYNA-VAKKWET 568 *********************************************************9*****************************.7****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++le+L++++gE ++Vn++++ ++l+de+v++es r+ vLkl++s++P+++++ + ++++ F++rf eal ++salfd+le+ +pre er+ XP_027071487.1 569 IKLEDLKIEEGEFVVVNCIYRSKNLFDETVAVESSRTIVLKLIRSINPDIFIHGIVNGAYSAPFFVTRFREALFHFSALFDMLETIVPREIPERT 663 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +E+e++gre+ nv+aceg er+er et+++W+ r +aGF+++pl+ +++k+a + + + + ++e+s++l+lgWk+r ++s+S+W+ XP_027071487.1 664 LIEKEIFGREALNVIACEGWERVERPETYKQWQVRNLRAGFRQIPLDREIMKKAIEKVTSGYHKDFVIDEDSQWLLLGWKGRIIYSLSCWT 754 *****************************************************999888888777*************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 756 aa Download sequence |
MDPSFLGIPA SARGIRLRNQ NLSTFGDLNP NGPTFETLYV DQKRVNHGLT TKNAPLQYNF 60 DGGVEFLPSD PSPSNLTSTS SLGVEDDFSE DLDFSDAVLR YINQMLMEED MEDKAYMLQE 120 SLDLQAKEKS FYEALGKKYP PSPEPHPTFI FQNGASPDEC FSGDQCNLTS TSSNPGSYIA 180 EPSSLNNLAH YDATSLVHCH RAHRAPSSSL SSSMVNSFLD SPSSPPYGSH SVWNFKKGVE 240 EASKFLPDGN KLLNFSINGL FPLELAEEIE EPILQEEGRD DVNFLPTGSR GRKNPHGGDT 300 DLEERSSKLA AVFTESTVRS EEFDIVLLHS MGEGQVALAA YQENLRTAKS KVMLQNGQPK 360 LKGSSGGKGR RKKQNVKKQV IDLRTLMIHC AQAVAADDHR SANELLKQIR QHASPFGDGN 420 QRLAHCFAQG LEARIAGTGS QIYKALVNKR TSAADFLKAF HLYLASCPFR KISNFASNKT 480 IMIESKNAVR VHVIDFGILY GFQWPTFFQR IAGREGGPPK VRITGIEFPQ PGFRPAERIQ 540 ETGHRLAEYA KMFKVPFEYN AVAKKWETIK LEDLKIEEGE FVVVNCIYRS KNLFDETVAV 600 ESSRTIVLKL IRSINPDIFI HGIVNGAYSA PFFVTRFREA LFHFSALFDM LETIVPREIP 660 ERTLIEKEIF GREALNVIAC EGWERVERPE TYKQWQVRNL RAGFRQIPLD REIMKKAIEK 720 VTSGYHKDFV IDEDSQWLLL GWKGRIIYSL SCWTPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 0.0 | GRAS family protein |