PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027071413.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 209aa    MW: 23323.3 Da    PI: 9.3304
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027071413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-054062123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C+k F++   L  H++ H
  XP_027071413.1 40 YRCSFCNKEFRSAQALGGHMNIH 62
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MEKVNLSGEK LKKGICCWDH AKFSYEKHGA YGFSWQQRNY RCSFCNKEFR SAQALGGHMN  60
IHRRDRARMR LSPSSDGLNS TPHTNPNFGS PSSALSADTL SSFAGFSSPI SSASTATATA  120
ADADAASEEQ AAAVCQSECD DHRLTWARRH VPKNLSKRAL LEVKELPILA KRTETRVWKK  180
KEVVRLDLNM GFFRDAKDDL DLELRLGLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-19C2H2 family protein