PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027070549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 341aa MW: 38279.7 Da PI: 8.2337 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.4 | 6e-32 | 58 | 111 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR+ XP_027070549.1 58 PRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNIKGLNIAHVKSHLQMYRS 111 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.8e-16 | 59 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_027070549.1 59 RLRWTPDLHLRFVHAVERLGGQeraTPKLVLQLMNiKGLNIAHVKSHLQMYR 110 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MEGSEDTECS KTCPSSGKDE VDENDGDKQK DGGNSSNSTV EENENKPSVR PYVRSKMPRL 60 RWTPDLHLRF VHAVERLGGQ ERATPKLVLQ LMNIKGLNIA HVKSHLQMYR SKKIDDPSQG 120 VTDHSHLWEG VDRNIFNLGQ IPMLPGLHQN RKSTFRYGDA SWNGLENSMQ MSAVRQSTNK 180 KRPGFYDTWT GRIVGSRNNE VYSGFRNSNQ LWSWQTHELQ SKMQSLPQQE YWQDQLKSSI 240 QVQLKVQDFS SCRSNIPGVG RSMIQKKRAG VKRKASDCNI HLNLSLGLGP IGDGHQEDSL 300 EEDDGHLSLS LCSPSSSKIT RLIDDASKEN ASGASTLDLT L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 2e-56 | G2-like family protein |