PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027070378.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 470aa MW: 51340.2 Da PI: 7.758 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.3 | 6.1e-32 | 253 | 308 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_027070378.1 253 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 308 68****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.3 | 7.1e-13 | 255 | 306 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_027070378.1 255 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 306 568*****************99*****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 470 aa Download sequence |
MMASPSELSL DCKPHSYSML LKSVGEQSDQ AHKLEEFLSR LEEERLKIDA FKRELPLCMQ 60 LLTNAMEASR QQLQSYRANQ VPKPLLEEFI PLKHPSSEGS DKAPTMSDKA NWMTSAQLWS 120 QASDQGTKQQ SPVTSPKGTT DIGFGAVNPK QVLDNKQRNG GGAFHPFSKD RSISCPSHAL 180 RAIPDLALAS SPDKDHAGDK KIIPESDLRR ESSCRVNSGS GVVLEQGKGA TTGQADSQTN 240 SNPNTTSSQT HRKARRCWSP DLHRRFVNAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS 300 HLQKYRLHTR RPSPSSQAAV SAQPQLVVLG GIWVPPEYAT AAAAAHGGAP AALYGAHPTT 360 HASAHYCATP VPQEFYPAQT PPPQPPHHQL HHHPLHNQLH VYKPPSQTQS SPESDVRGNG 420 DRSESIEDGK SDSSSWKVDS NGENNAAERK VLVLREDGEE SNGSEITLKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G03500.1 | 1e-90 | G2-like family protein |