PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027070370.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 385aa MW: 42956.5 Da PI: 8.534

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027070370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.9	1.4e-51	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+v+yL+kk+++ +l++ +i++v++yk++PwdLpkk+ +e+ewyfF++rd+ky++g r+nr+++sgyWkatg+dk++ls+ XP_027070370.1 12 LPPGFRFHPSDEELIVHYLRKKATKIPLPA-AIIADVELYKFNPWDLPKKALFGEDEWYFFTPRDRKYPNGMRPNRMASSGYWKATGTDKPILSS 105 79*************************9.88***********88888999*********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++g kk Lvfy+gr pkg+ktdW+mheyrl XP_027070370.1 106 sGAKVIGAKKALVFYTGRPPKGNKTDWIMHEYRL 139 67778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEKDPLNQEI QLPPGFRFHP SDEELIVHYL RKKATKIPLP AAIIADVELY KFNPWDLPKK 60 ALFGEDEWYF FTPRDRKYPN GMRPNRMASS GYWKATGTDK PILSSSGAKV IGAKKALVFY 120 TGRPPKGNKT DWIMHEYRLP EATWTAKKER SMRLDDWVLC RVRQKTGTAG NLWEDRNGPA 180 SKETAQCHPK LDKHCPVPMG TTSTAPATAE MVREYLYRDC PMVPFLFGSQ EFACMDTVSN 240 IISFQGSKAS SQTGPPCVDS VSNISFEGNK TSSVCGDNFN IDYLQNAVLP SSSSSGNGLL 300 HMRKRKNILT IEGNGGEGDI SFTHPHKKQT HRSVGQMEGN QPQSTSNDTT GTVSCSTNQM 360 ERNNSSADQL GSIMMYQDLY SLAFA

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEKDPLNQEI QLPPGFRFHP SDEELIVHYL RKKATKIPLP AAIIADVELY KFNPWDLPKK  60
ALFGEDEWYF FTPRDRKYPN GMRPNRMASS GYWKATGTDK PILSSSGAKV IGAKKALVFY  120
TGRPPKGNKT DWIMHEYRLP EATWTAKKER SMRLDDWVLC RVRQKTGTAG NLWEDRNGPA  180
SKETAQCHPK LDKHCPVPMG TTSTAPATAE MVREYLYRDC PMVPFLFGSQ EFACMDTVSN  240
IISFQGSKAS SQTGPPCVDS VSNISFEGNK TSSVCGDNFN IDYLQNAVLP SSSSSGNGLL  300
HMRKRKNILT IEGNGGEGDI SFTHPHKKQT HRSVGQMEGN QPQSTSNDTT GTVSCSTNQM  360
ERNNSSADQL GSIMMYQDLY SLAFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-78	NAC family protein