PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027070332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 260aa MW: 29912.6 Da PI: 7.5459 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.2 | 7.3e-35 | 23 | 114 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y ++ed++++e+isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv + + weF+++ F+kg+++ll++ XP_027070332.1 23 FLLKTYMLVEDPSTDEVISWNTEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATAR---------WEFSNDMFRKGERDLLCE 108 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_027070332.1 109 IRRRKA 114 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MMMEPECEKS LLEYVRKSSP PPFLLKTYML VEDPSTDEVI SWNTEGTAFV VWQPAEFARD 60 LLPTLFKHSN FSSFVRQLNT YGFRKVATAR WEFSNDMFRK GERDLLCEIR RRKAWTNKSH 120 SNNNKGQQSH HHHQAAAAAA APTKDQSDED QSQRSSSTSS SSDQYTVLID ENKRLKRENG 180 VLSTELSTMK KKCKELLDLV AVYADQAGEK NDGSIVDNDE FDERPKLFGV RLEVQGEIER 240 KRKFAEISRN AQVFLFQSCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 9e-69 | HSF family protein |