PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 274aa MW: 30816.6 Da PI: 9.4947 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.1 | 1.3e-32 | 144 | 200 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027069942.1 144 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 200 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSVSTE VLVFGNSRSS LTLPSQQNAG 60 LVTTSNELEA KFLEKSGGEI YREVETAKFL ESDQNSAQEL LKFSSIASPT MSEHLIPVTQ 120 LKLVHPDLQS MHDSRLALPL ELAEEPVYVN AKQYHGILRR RQLRAKAELE NKVAKARKPY 180 LHESRHLHAM RRARGCGGRF LSKKNVDKSD SRAASKKSID FNATPTEMKD SLGSQHPFSS 240 TSQKSCNEVR GFLLQEMQNT NTFEWGYQYH CKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 7e-29 | NF-YA family protein |