PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 297aa MW: 33370.3 Da PI: 8.6939 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.9 | 1.4e-32 | 167 | 223 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027069941.1 167 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 223 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSVSTE VLVFGNSRSS LTLPSQQNAG 60 LVTTSNELEA KFLEKSGGEI YREVETAKFL ESDQNSAQEL LKFSSIASPT MSEHLIPVTQ 120 LKLACTTYPC PESSFWGNSP DHGQTWVHPD LQSMHDSRLA LPLELAEEPV YVNAKQYHGI 180 LRRRQLRAKA ELENKVAKAR KPYLHESRHL HAMRRARGCG GRFLSKKNVD KSDSRAASKK 240 SIDFNATPTE MKDSLGSQHP FSSTSQKSCN EVRGFLLQEM QNTNTFEWGY QYHCKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-30 | NF-YA family protein |