PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027069936.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YA
Protein Properties Length: 338aa    MW: 37791 Da    PI: 7.1793
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027069936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32208264158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF
  XP_027069936.1 208 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 264
                     69****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSVSTE VLVFGNSRSS LTLPSQQNAG  60
LVTTSNELEA KFLEKSGGEI YREVETAKFL ESDQNSAQEL LKFSSIASPT MSEHLIPVTQ  120
LKLACTTYPC PESSFWGNSP DHGQTWENGM HGKSDSGNRF LLSDDSLEHR GTLYGISDVE  180
LSGEIDSVHP DLQSMHDSRL ALPLELAEEP VYVNAKQYHG ILRRRQLRAK AELENKVAKA  240
RKPYLHESRH LHAMRRARGC GGRFLSKKNV DKSDSRAASK KSIDFNATPT EMKDSLGSQH  300
PFSSTSQKSC NEVRGFLLQE MQNTNTFEWG YQYHCKTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.13e-28NF-YA family protein