PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | CPP | ||||||||
Protein Properties | Length: 637aa MW: 68984.5 Da PI: 7.8656 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 45.8 | 1.2e-14 | 153 | 192 | 2 | 42 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ XP_027069803.1 153 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCFNNVEN 192 89**************************.********9875 PP | |||||||
2 | TCR | 50.8 | 3.4e-16 | 237 | 276 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_027069803.1 237 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 276 589***********************************65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 637 aa Download sequence |
MEQSEGGDFP PKNVQSETTG QQQPPPQVGT DIPPKKLARQ LDFTGYTGVS SAAASSATAT 60 PALREHTQQT QPPQVAVMPS LPQPQLQQPV PRPTQPPKSQ LQPQPQPPIP LMSMQQPPVP 120 PAVHPQMRPM KPESPRPRPR SNAGDAKDGT PKKQKQCNCK HSRCLKLYCE CFASGIYCDG 180 CNCVNCFNNV ENEAARREAV ENTLERNPNA FRPKIASSPH GIRDSREEPG EGLVIGKHNK 240 GCHCKKSGCL KKYCECFQAN ILCSENCKCM DCKNFEGSEE RQALFHGDHA NNIAYIQQAA 300 NAAITGAIGS SGYGSPPVNK KRKGQELFFA STVKDPLNRL GQFQQANHMK TTVPSSTLSS 360 IPGARLGNPA GMGPSKFTYR SLLADIIQPQ DLKELCSVLV VYSAEAAKML ADERNATERS 420 SQEHRESHLA STQDQSQNQK DLSVAEKARL ADSFDGNSSE KIGPDESVSD GADVSKSRPM 480 SPGTLALMCD EQDAMFTTAA SPSDLTGQSN MSCQLPHGQG LTEAYAEQER IVLTKFRDCL 540 NKLVTLGEIK ETKCSSFARS ESSNHRDLVS NGSASVRNET WNQHEPLSNG IPKSTIPPPP 600 RTPQIVTSAG TATSDLLPKI PSSVENGDVK PKPEKAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 1e-160 | CPP family protein |