PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 483aa MW: 53932.4 Da PI: 4.8473 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 110.7 | 1.1e-34 | 87 | 178 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d++l+++isw ++g+sfvv+d+ efa+++Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+ +sF +gk++ll++ XP_027069386.1 87 FLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFASESFLRGKRHLLKN 172 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_027069386.1 173 IQRRKS 178 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MNPHDRDENS VFPSSNSPSS SPPENQSSEV VPLSMVSPFV DLESRQHLQE IVPGILSGGT 60 ITTEAARSFP GMPQPMECLQ GTPVPPFLSK TFDLVDDPAL DSIISWGASG QSFVVWDPVE 120 FARRILPRNF KHNNFSSFVR QLNTYGFRKI DADKWEFASE SFLRGKRHLL KNIQRRKSPH 180 SHQLGGSSGS TGEAGKIVLE GEVEKLRKER SLMMQEVFEL QEQQLGTIQH VEAVNEKLQA 240 AERRQKLMVS FMAKLFQNPD ILDRLKQIKE QKQITSSRTM RKFLKHQPHE PGKAESFLER 300 QIVKYRTNFR DLATPSAAPE FDPGNIAADE MALTSEFLTI SEPSGGGFSS QGTEDTLLKW 360 KTVVPPEVIP EYFVTSPDDS AKEKNFPEYS SLDIESMLKE QGPWSMDFEA GAGVSSSSNE 420 IWGNAVNYEI PELMVSSGLS DIWNLGSLPA AGSSGAEKWP DDEFPFSKLD DQVGQHKDES 480 SNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 2e-97 | HSF family protein |