PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027069386.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 483aa    MW: 53932.4 Da    PI: 4.8473
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027069386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.71.1e-34871782102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k++++++d++l+++isw ++g+sfvv+d+ efa+++Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++         weF+ +sF +gk++ll++
  XP_027069386.1  87 FLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFASESFLRGKRHLLKN 172
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+ks
  XP_027069386.1 173 IQRRKS 178
                     ****97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
MNPHDRDENS VFPSSNSPSS SPPENQSSEV VPLSMVSPFV DLESRQHLQE IVPGILSGGT  60
ITTEAARSFP GMPQPMECLQ GTPVPPFLSK TFDLVDDPAL DSIISWGASG QSFVVWDPVE  120
FARRILPRNF KHNNFSSFVR QLNTYGFRKI DADKWEFASE SFLRGKRHLL KNIQRRKSPH  180
SHQLGGSSGS TGEAGKIVLE GEVEKLRKER SLMMQEVFEL QEQQLGTIQH VEAVNEKLQA  240
AERRQKLMVS FMAKLFQNPD ILDRLKQIKE QKQITSSRTM RKFLKHQPHE PGKAESFLER  300
QIVKYRTNFR DLATPSAAPE FDPGNIAADE MALTSEFLTI SEPSGGGFSS QGTEDTLLKW  360
KTVVPPEVIP EYFVTSPDDS AKEKNFPEYS SLDIESMLKE QGPWSMDFEA GAGVSSSSNE  420
IWGNAVNYEI PELMVSSGLS DIWNLGSLPA AGSSGAEKWP DDEFPFSKLD DQVGQHKDES  480
SNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.12e-97HSF family protein