PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069259.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Dof | ||||||||
Protein Properties | Length: 355aa MW: 37746.1 Da PI: 9.2577 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124 | 5e-39 | 79 | 138 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+s+ntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_027069259.1 79 EAALKCPRCESSNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 138 6789*****************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MVFSSIPAYL DPANWQQPSN HQAGNSSGNH PPLQPPAQQQ PVPSFPPAQP HAGGGPGAVS 60 IRPGSMAERA RLANIPLPEA ALKCPRCESS NTKFCYFNNY SLTQPRHFCK TCRRYWTRGG 120 ALRNVPVGGG CRRNKRTKAT SSKSPVSSAD RQTTSSSTGT VSSNSTPSAN VLGLTPQIPP 180 MRFLSPLSQL SDHYSPAGDI SLNYGANNSA PLLGTSEMNF HIYPNNLLSC GLGGGAASLL 240 PGGGIEQWRL QQAQQFPFLG GLEASPPGLY SQLQASSVEP SGFVGETSRH HVRPKLSSSI 300 LTQQASVKME DNHQELNLST QLMGIPGNHD QWNGTAAAWT TDLASFSSSS TTNPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37590.1 | 8e-57 | Dof family protein |