PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 24477 Da PI: 5.468 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33 | 1e-10 | 37 | 81 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + e Er+RR+++ + ++ Lr ++P+ + K++Ka+i + A+ YI++L XP_027069244.1 37 NIESERKRRKKLTETLHALRAVVPNiS------KMDKASIIKDAIGYIQEL 81 5689*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MDDIDVLCND YWENMILQTE QLGSSPDGAQ SSAASKNIES ERKRRKKLTE TLHALRAVVP 60 NISKMDKASI IKDAIGYIQE LHNQERMIQA EISELESKRR IFPDFDQEIS YNSKPKRSRF 120 EQTCDSSESR SSPIEVLEFS VSHMGEKTIV VSLTCSKRTD TMVKICEVFE SLNLKIITAN 180 IIAFSDRLLK TLFLEANEEE KDVKIKIQTA IAALK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 41 | 48 | ERKRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 1e-68 | bHLH family protein |