PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027068692.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 587aa MW: 64462.5 Da PI: 8.5266

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027068692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.4	1.2e-32	256	313	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ +++++ei+Y+g+Hnh+k XP_027068692.1 256 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERNL-EGHITEIVYKGNHNHPK 313 8**************************************.*************85 PP
2	WRKY	105.2	3.5e-33	421	479	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_027068692.1 421 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYSGCPVRKHVERASHDLRAVITTYEGKHNHD 479 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MASSGGSLNT SLNSYSSYSF PNQFMATSFS DLINGNNTST SGNDQGMMNN RSNQDKPPFS 60 WELHDQMINK QAGTTPAEIP KFKSFPPTSL PLSPPPVSPS SFLAFPPSLS PSVLLDSPVL 120 FSNSSTLPSP TTGTFSSLVR KDEDTKFVSD FSFQSQTRPP LSSSSLFHAS AGKSSSQEAS 180 MKQHAGGWNF DNKPSQFIES SAVKHGIRSE LAPTTQRLGA EVPATQGSMQ SDPAPDSSHV 240 HYSQPSQYVR EQRKSDDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERNLEGHI 300 TEIVYKGNHN HPKPQSTRRS SSQSIQNPSY THSEISHHSN TLGENAQTDS LPNAENSSAS 360 FGDDEFDQTS AISNSRDDDE NEPDAKRWKG ENDSEAISVS GSKTVREPRI VVQTTSDIDI 420 LDDGYRWRKY GQKVVKGNPN PRSYYKCTYS GCPVRKHVER ASHDLRAVIT TYEGKHNHDV 480 PAARGSGSYA VNRPSAINNN NDLPAAIKPL ATNSNSVYRT NFANSLQNPI PRPQSQAPFT 540 LQMLPSQGSF GISGNSASAN QVQQTGNAFH MAKQEPKDDL FFNSFLN

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MASSGGSLNT SLNSYSSYSF PNQFMATSFS DLINGNNTST SGNDQGMMNN RSNQDKPPFS  60
WELHDQMINK QAGTTPAEIP KFKSFPPTSL PLSPPPVSPS SFLAFPPSLS PSVLLDSPVL  120
FSNSSTLPSP TTGTFSSLVR KDEDTKFVSD FSFQSQTRPP LSSSSLFHAS AGKSSSQEAS  180
MKQHAGGWNF DNKPSQFIES SAVKHGIRSE LAPTTQRLGA EVPATQGSMQ SDPAPDSSHV  240
HYSQPSQYVR EQRKSDDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERNLEGHI  300
TEIVYKGNHN HPKPQSTRRS SSQSIQNPSY THSEISHHSN TLGENAQTDS LPNAENSSAS  360
FGDDEFDQTS AISNSRDDDE NEPDAKRWKG ENDSEAISVS GSKTVREPRI VVQTTSDIDI  420
LDDGYRWRKY GQKVVKGNPN PRSYYKCTYS GCPVRKHVER ASHDLRAVIT TYEGKHNHDV  480
PAARGSGSYA VNRPSAINNN NDLPAAIKPL ATNSNSVYRT NFANSLQNPI PRPQSQAPFT  540
LQMLPSQGSF GISGNSASAN QVQQTGNAFH MAKQEPKDDL FFNSFLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-124	WRKY family protein