PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027068041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SBP | ||||||||
Protein Properties | Length: 390aa MW: 40656.7 Da PI: 9.3931 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 138.2 | 2.4e-43 | 88 | 163 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+ dls+ak y++rhkvC +hsk+p+v+v+gl+qrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_027068041.1 88 RCQVEGCKLDLSDAKPYYSRHKVCGAHSKSPTVIVAGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 163 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MELASGSSSS SPSSSDSLNG LKFGKKIYFE AAVAGTADGA GGGQARQGSK PGGGVDSESK 60 ASESGRPPPA PAKKGRSGVA PGGGQPPRCQ VEGCKLDLSD AKPYYSRHKV CGAHSKSPTV 120 IVAGLQQRFC QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKPPPGSLLS SRYGSLSSSF 180 FESSSRSGGF LMDFSAYPAL SGRDSWPNGR VSVRATGNQP TGTGKFLQHP WQGNPENPPS 240 ELLLHSSAGR TTYVGPAISS GGCLAGVSDS SRALSLLSTH SWGSGNQSSS LGANGLANVN 300 GMPCGVIQAS GSHGEAIDHF SSPMWGFKGG ENNSGSNEIP PELGLGQLSQ PASSQYSGDL 360 DASSQNGREY LGLEHSRGYN SSIQHMHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 8e-52 | SBP family protein |