PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027067964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 746aa MW: 85940.4 Da PI: 7.4297 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.3 | 1.7e-25 | 31 | 118 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn YA ++GF vrk++ +k + g +t+r+f C+keg+r+++k++ ++++r+raet+tgC a++ + +++ ++k++vt+++ eHnH+l XP_027067964.1 31 KFYNMYAATIGFGVRKEYCNKD-KLGIVTSRKFACNKEGFRRQDKRD-RETKRPRAETKTGCLACVIILLDRdTKKYKVTQFVAEHNHPL 118 6******************998.7788*****************999.99******************999989**************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 746 aa Download sequence |
MGDKEDQLDM TQKGFIPYYG QLFDSDDKAY KFYNMYAATI GFGVRKEYCN KDKLGIVTSR 60 KFACNKEGFR RQDKRDRETK RPRAETKTGC LACVIILLDR DTKKYKVTQF VAEHNHPLHI 120 PQCVHLIPSQ RRTTITQDNS ELVDAYGLSL KQSNNLVDKL GYLPNKRSRG LRFGEAGTIF 180 RYFQQQLLEN PSFYFAVQLD SEEQLTNVFW ADARMTIDYK YFGEVVTFDT TFRKNEEYRP 240 LGIFLGFNHH RQMVIFGAAL LYDDSVDSYK WLFQTFLEAM SGKPPRTFFT DQEPAMAKAS 300 ASVMPNTFHG LCTHHIRQNF LKHLGHMMRT ETGLVQLFSK CMLEIEDEVA FEETWREMLQ 360 KHNLDSNTWL KSIYELREKW AKTYMKTKLT LGMRSKQLSK SFNADLKHHL KTDQDLVEFF 420 TEFHRAVEKR RYKELTAEYG ARQKVPSLKI KYSPMLNQVA EIYTPTIFEE FQDEFDVSLA 480 LVVKGHTVND NVHEYMLARY DGGDDQRVIC EKSTQSVLCS CQKYECEGIL CSHAIKVLDL 540 LNIKLVPNDL IEKRWTRDAK KGILKGPNQE NDMEEDVHLK VVGRYRMLCS TLVRVAIRAA 600 ECQEATDYLV QCVDKLTRKV EEICNKQMSI EQASTNHQSS YNATDQEDVL VISMGVNPSG 660 SKSGQGCKSN KRTGSWTDMF GEKSMYESNN NQVQIADQSQ EVSVDHVSSP QSANNSVSAR 720 SCSQSTGDLL HLHQATSYPS QVNTDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-100 | FAR1 family protein |