PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027067694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 284aa MW: 32039.7 Da PI: 7.2375 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.3e-09 | 104 | 146 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++rRR+ +N+ f L llP +K +K++i ++ v+YIk+L+ XP_027067694.1 104 ADKRRREILNKQFLALAALLPGM-----TKTDKISIMRESVKYIKQLR 146 78********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MDPSINFPFE NLEALSGEDG ELDSVLGENN RFPAFLDQLW ASFFSPDNLS SSGPEHDCPV 60 ADSHPLSSVP DQLLNDTSPC ASSHKNRISS LAARNLQYKK NLLADKRRRE ILNKQFLALA 120 ALLPGMTKTD KISIMRESVK YIKQLRKEHN KLKEHNPNQA VIVKKSGVFE EQNGCSIHER 180 SSVCNQEQLP EIEVRMYEKN ILLTIRCQKD KVVLANIHVE IAKLNLTVIS CDIMSFAGLT 240 YEIIILAEMD TDFSLREKCL VKRLRSALAI HEKLNSSIRS GHNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 4e-29 | bHLH family protein |