PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027067546.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 829aa    MW: 95710.3 Da    PI: 8.0086
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027067546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.62e-2326113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYn+YA ++GFsvrk++ +k  ++g +t+r++ C keg +++ + + +  +rtra t+tgC ak+++ + + + k++v++l+leHnHel
  XP_027067546.1  26 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113
                     6*****************9998.8999****************9999.999*******************999****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
MDCSKLTEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSE TQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNVGYTREDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLAA MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMIG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMIVEFAVMR YDGGPERIVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YIKRRWTKRA WAGDCFDRRR REVVADPKIM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLAKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIMN  660
EMGEAVVARG IKKRGGGKKS RVMRNWIDKF DRVKRKSRLS RTTQTTASES EPTSVSYEEY  720
MFMGCRSSTD SVSTHSMSQT VNDPPNAIAP NIDKSETEER AALLTHCDVD AYHVFAPSPQ  780
VINFYRYSTY LCTVVNWRLG YRISLIGRND TQGLQLRVDV ASPENEIDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1563581KRRWTKRAWAGDCFDRRRR
2577582DRRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-110FAR1 family protein