PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027066963.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 307aa    MW: 34093 Da    PI: 5.9952
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027066963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_027066963.1 35 KYVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 84
                    8********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEIHFQQPEQ EFAIPVSKMS NKFKGRSRSS GQNNKYVGVR QRPSGRWVAE IKDTTQKIRM  60
WLGTFETAEE AARAYDEAAC LLRGSNTRTN FVPQQISPDS PLASRIKTLL NKRKNAKVPQ  120
SNTDMHESSG ATPSPANSVS VNNCIASSSN SAASSPVSSS GEYDSSSIDS VISFEQKTPE  180
GHLFDDAYKP DLSNCCAKGF EMEMGPSYHD QTHIPSSGLQ AQGFDHRFAF STTQDHHQLL  240
QLPKLNESGL PEIANHHMEL SEFERMKVER QISASLYAMN GVQEYMETVL DPIEALWDLP  300
PLCSLLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-26ERF family protein