PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 547aa MW: 61003.8 Da PI: 6.2678 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.1 | 3.2e-13 | 361 | 405 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ Lr+llP+ +K +Ka++L+ + eY++sL XP_027066709.1 361 HMISERRRREKLNESFQALRSLLPPG-----TKKDKASVLTSTREYLSSL 405 7889********************97.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 547 aa Download sequence |
MDSVFSLGEG DRAIFLQNLV QSSGCTYICL WSYDPQPSIC LRYRDGYYHE RSNNQQPSTS 60 SGSLAQRRFI EYGQSIIIVE RSHIPGLAFL NNLPYMELQL ADLRRMASTE TQRLFYEEAG 120 IKTAIFMGCN AGEIELGFSD GSQVNMGLEM RNLFPVDFSH PLLDPTTTRD QLPQQPSTTD 180 QNRPASSSSS LRSLSYDSPE YSPLLFDMPA TSYLVPEPQR EAMIQQALGS AHRPVFSPTA 240 ASPHEQAIWA LNQIRNIQLP TIESEDAAMT EAMIAVISSS ASPSSSVQQP QQNFPPNYRV 300 NGSHASAFRR YRPSLAPRPP TSSRIQGENV LKRSITFLRT LNSMRSQEQM PAGRTSSTLH 360 HMISERRRRE KLNESFQALR SLLPPGTKKD KASVLTSTRE YLSSLKDQVA ELSKRNHVLE 420 AQLLPKMSAA VEETISGVSS VERVEVQIRD VGASTSASSS SSSSSRIVDL QVILRAEVSM 480 VDLVVRLLEF LKIDQNVSLM SVEANTRMAE PTSVSNVVLM RLRIEEGEWD ESAFQEAIRR 540 VLNDLAQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 365 | 370 | ERRRRE |
2 | 366 | 371 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 3e-66 | bHLH family protein |