PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 365aa MW: 41237.8 Da PI: 6.7494 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.00011 | 286 | 308 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_027066639.1 286 FMCRKCGKAFAVRGDWRTHEKNC 308 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MTDPYSNFYN QWFKFNTPYP FSSSISSNHQ PPNYVQNFYY SNNCIQYNGT STSFHSHNSP 60 PSSPPLREAL PLLSLSPTRH DHGAISEEPC CQEMDMERSS SSKSKEDSQK TLFPGAVHEV 120 HEEAEAEDDD EDVTVALHIG LPNPSAADLA SVLSSSVETT DKDHDQDGDV SAAGYHPIMN 180 RLNKGQYWIP TPSQILIGPT QFSCPVCCKT FNRYNNMQMH MWGHGSQYRK GPESLRGTQP 240 TGMLRLPCYC CAPGCRNNID HPRAKPLKDF RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD 300 WRTHEKNCGK LWYCICGSDF KHKRSLKDHI KAFGNGHGAY GVNSFEEDDE PASEIEQDDD 360 QSMHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-131 | C2H2 family protein |