PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027066486.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 471aa MW: 51477.4 Da PI: 7.758

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027066486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.1e-32	253	308	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_027066486.1 253 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 308 68****************************************************97 PP
2	Myb_DNA-binding	40.3	7.1e-13	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_027066486.1 255 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 306 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MMASPSELSL DCKPHSYSML LKSVGEQSDQ AHKLEEFLSR LEEERLKIDA FKRELPLCMQ 60 LLTNAMEASR QQLQSYRANQ VPKPLLEEFI PLKHPSSEGS DKAPTMSDKA NWMTSAQLWS 120 QASDQGTKQQ SPVTSPKGTT DIGFGAVNPK QVLDNKQRNG GGAFHPFSKD RSISCPSHAL 180 RAIPDLALAS SPDKDHAGDK KIIPESDLRR ESSCRVNNGS GVVLEQGKGA TTGQADSQTN 240 SNPNTTSSQT HRKARRCWSP DLHRRFVNAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS 300 HLQKYRLHTR RPSPSPQAAV SAAPQLVVLG SIWVPPEYAT AAAAAAHGGA PTALYGPHPT 360 THASAHYCAT PVPQEFYPAQ TPPPQPPHHQ LHHHPLHNQL HVYKPPSQTQ SSPESDVRGN 420 GDRSESIEDG KSDSSSWKVD SNGENNAAER KVLVLREDGE ESNGSEITLK F

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MMASPSELSL DCKPHSYSML LKSVGEQSDQ AHKLEEFLSR LEEERLKIDA FKRELPLCMQ  60
LLTNAMEASR QQLQSYRANQ VPKPLLEEFI PLKHPSSEGS DKAPTMSDKA NWMTSAQLWS  120
QASDQGTKQQ SPVTSPKGTT DIGFGAVNPK QVLDNKQRNG GGAFHPFSKD RSISCPSHAL  180
RAIPDLALAS SPDKDHAGDK KIIPESDLRR ESSCRVNNGS GVVLEQGKGA TTGQADSQTN  240
SNPNTTSSQT HRKARRCWSP DLHRRFVNAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS  300
HLQKYRLHTR RPSPSPQAAV SAAPQLVVLG SIWVPPEYAT AAAAAAHGGA PTALYGPHPT  360
THASAHYCAT PVPQEFYPAQ TPPPQPPHHQ LHHHPLHNQL HVYKPPSQTQ SSPESDVRGN  420
GDRSESIEDG KSDSSSWKVD SNGENNAAER KVLVLREDGE ESNGSEITLK F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-89	G2-like family protein