PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027066353.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 298aa MW: 33115.7 Da PI: 7.8581

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027066353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.1e-31	87	143	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C +kk+ver++ dp++++itYeg H h XP_027066353.1 87 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERCSGDPETLIITYEGLHLH 143 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MADLQPTPWS ADELVGELLD NESPFFIIPD QVAEASNLDV ASNHSPKSNE HVSQARVSML 60 DRDLSRTHEN NYRYTLRIKS CDNALADDGY KWRKYGQKSI KNSPNPRSYY RCTNPRCGAK 120 KQVERCSGDP ETLIITYEGL HLHFAYPFFP CNRPQQQHVN SPAKKKQKPT SSSNSQGRND 180 QEAQRSVTSS INDAEESPDN VTHCSPVIPP HRQQSATSIQ DGQKGTEGDY SPQGLLEDVV 240 PLPIRNPLIN PTSVNSSSSS SFPSTPTSPS PFRGPGLFNL RLRRILGLYV ALVFTSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	1e-41	WRKY family protein