PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027066215.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 340aa MW: 38080.5 Da PI: 7.9571

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027066215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	6e-32	58	111	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR+ XP_027066215.1 58 PRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNIKGLNIAHVKSHLQMYRS 111 8****************************************************7 PP
2	Myb_DNA-binding	51.8	1.8e-16	59	110	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_027066215.1 59 RLRWTPDLHLRFVHAVERLGGQeraTPKLVLQLMNiKGLNIAHVKSHLQMYR 110 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MEGSEDTECS KACPSSGKDE VDENDGDKQK DGGSSSNSTV EENENKPSVR PYVRSKMPRL 60 RWTPDLHLRF VHAVERLGGQ ERATPKLVLQ LMNIKGLNIA HVKSHLQMYR SKKIDDPSQG 120 VTDHSHLWEG VDRNIFNLGQ IPMLPGLHQN QKSTFRYGDA SWNGLENSMQ MSAMRQSTNK 180 KRPGFYDTWP GRIVGSRNND VYSGFRNSNQ LWSWQTHELE SKMQSLPQQE YWQDQLKSSI 240 QVQLKVQDFS SCRSNIPGVG RSMIQKKRAG VKRKATDCNI HLNLSLGLGP IGDGHQDSLE 300 DDDGHLSLSL CSPSSSKITR LIDDASKENA SGASTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-56	G2-like family protein