PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027066119.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YA
Protein Properties Length: 275aa    MW: 30903.7 Da    PI: 9.4947
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027066119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.11.3e-32145201158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF
  XP_027066119.1 145 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 201
                     69****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSSVST EVLVFGNSRS SLTLPSQQNA  60
GLVTTSNELE AKFLERSGGE IYREVETAKF LESDQNSAQE LLKFSSIASP TMSEHLIPVT  120
QLKLVHPDLQ SMHDSRLALP LELAEEPVYV NAKQYHGILR RRQLRAKAEL ENKVAKARKP  180
YLHESRHLHA MRRARGCGGR FLSKKNVDKS DSRAASKKSI DFNATPTEMK DSLGSQHPFS  240
STSQKSCNEV KGFLLQEMQN TNTFEWGYQY HCKTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.17e-29NF-YA family protein