PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 275aa MW: 30903.7 Da PI: 9.4947 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.1 | 1.3e-32 | 145 | 201 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027066119.1 145 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 201 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSSVST EVLVFGNSRS SLTLPSQQNA 60 GLVTTSNELE AKFLERSGGE IYREVETAKF LESDQNSAQE LLKFSSIASP TMSEHLIPVT 120 QLKLVHPDLQ SMHDSRLALP LELAEEPVYV NAKQYHGILR RRQLRAKAEL ENKVAKARKP 180 YLHESRHLHA MRRARGCGGR FLSKKNVDKS DSRAASKKSI DFNATPTEMK DSLGSQHPFS 240 STSQKSCNEV KGFLLQEMQN TNTFEWGYQY HCKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 7e-29 | NF-YA family protein |