PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 298aa MW: 33457.4 Da PI: 8.6939 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.9 | 1.4e-32 | 168 | 224 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027066118.1 168 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 224 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSSVST EVLVFGNSRS SLTLPSQQNA 60 GLVTTSNELE AKFLERSGGE IYREVETAKF LESDQNSAQE LLKFSSIASP TMSEHLIPVT 120 QLKLACTTYP CPESSFWGNS PDHGQTWVHP DLQSMHDSRL ALPLELAEEP VYVNAKQYHG 180 ILRRRQLRAK AELENKVAKA RKPYLHESRH LHAMRRARGC GGRFLSKKNV DKSDSRAASK 240 KSIDFNATPT EMKDSLGSQH PFSSTSQKSC NEVKGFLLQE MQNTNTFEWG YQYHCKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-30 | NF-YA family protein |