PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 317aa MW: 35487.6 Da PI: 7.9616 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.8 | 1.6e-32 | 187 | 243 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+e e+k+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027066117.1 187 EEPVYVNAKQYHGILRRRQLRAKAELENKV-AKARKPYLHESRHLHAMRRARGCGGRF 243 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MREKSGTFDK LESAVKSISH ASTDSRSYLS GFENNSSVST EVLVFGNSRS SLTLPSQQNA 60 GLVTTSNELE AKFLERSGGE IYREVETAKF LESDQNSAQE LLKFSSIASP TMSEHLIPVT 120 QLKLACTTYP CPESSFWGNS PDHGQTWHRG TLYGISDVEL SGEIDSVHPD LQSMHDSRLA 180 LPLELAEEPV YVNAKQYHGI LRRRQLRAKA ELENKVAKAR KPYLHESRHL HAMRRARGCG 240 GRFLSKKNVD KSDSRAASKK SIDFNATPTE MKDSLGSQHP FSSTSQKSCN EVKGFLLQEM 300 QNTNTFEWGY QYHCKTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 2e-28 | NF-YA family protein |