PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027066038.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 528aa    MW: 59030.1 Da    PI: 4.9117
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027066038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.51.2e-341382292102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k++++++d++l+++isw ++g+sfvv+d+ efa+++Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++         weF+ +sF +gk++ll++
  XP_027066038.1 138 FLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFASESFLRGKRHLLKN 223
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+ks
  XP_027066038.1 224 IQRRKS 229
                     ****97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MSASTYIYSA YIPLSSFTEN PHQNLPSSFR NNFSKNSNPF FFFSFLVAQC IMNPHDRDEN  60
SVFPSSNSPS SSPPENQSSE VVPLSMVSPF VDLESRQHLQ EIVPGILSGG TITTEAARSF  120
PGMPQPMECL QGTPVPPFLS KTFDLVDDPA LDSIISWGAS GQSFVVWDPV EFARRILPRN  180
FKHNNFSSFV RQLNTYGFRK IDADKWEFAS ESFLRGKRHL LKNIQRRKSP HSHQLGGSSG  240
STGEAGKIVL EGEVEKLRKE RSLMMQEVFE LQEQQLGTIQ HVEAVNEKLQ AAERRQKLMV  300
SFMAKLFQNP DILDRLKQIK EQKQITSSRT MRKFLKHQPH EPGKAESFLE GQIVKYRTNF  360
RDLATPSAAP EFDPGAVEQL PEFTLQEPSG GGFSSQGTED TLLKGKTVVP PEVIPEYFVT  420
SPDDLAKEKN FPEYSSPDIE SMLKEQEPWS MDFEAGAGVS SSSNEIWGNA VNYEIPELMV  480
SSGLPDIWNL GSLPAAGSSG AEKWPDDESP FSKLDDQVGQ HKDESSNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-103HSF family protein