PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027065578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 25131.5 Da PI: 4.7564 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.6 | 8.4e-12 | 36 | 80 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + e Er+RR+++ + ++ Lr ++P+ + K++Ka+i + A++YI++L XP_027065578.1 36 NIESERKRRQKLTETLHALRAVVPNiS------KMDKASIIKDAIDYIQEL 80 5689*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MDDVDVYKDY WENMILQTEQ LGSSPDGAQS SAASKNIESE RKRRQKLTET LHALRAVVPN 60 ISKMDKASII KDAIDYIQEL HNQERVIQAE ISELESKRSI FLDFDEEISC NSKPKRSRFE 120 QTCDSAESRS SPIEVLELRV SHMGEKTIVV SLTCSKRTDT MVKICEVFES LNLKIITANI 180 IAFSGSVLKT LFLEANEEET DVVKIKIQTA IAALNDPDSP MSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 40 | 45 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-75 | bHLH family protein |