PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027065300.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 417aa MW: 45551.3 Da PI: 8.2525

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027065300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	80.5	1.8e-25	108	163	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+ XP_027065300.1 108 DGYNWRKYGQKQVKSPQGSRSYYRCTYSECCAKK-IECSDDSNRVMEIVYRSHHNHD 163 9*****************************98.*******************7 PP
2	WRKY	100.9	7.3e-32	279	336	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+++++++v+itY+g H+h+ XP_027065300.1 279 ADGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAKDNTNAVIITYKGVHDHD 336 6********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MQRLEPAEEL KDQVGMSYQE EFRIIADQAV PDQTQNQQEP PNGPRSSEPS PTSVTQPISS 60 VPSPTLPEQK MSPGDNRNTX HTSEADKKNS FDPKTLSVVS IQKTPSPDGY NWRKYGQKQV 120 KSPQGSRSYY RCTYSECCAK KIECSDDSNR VMEIVYRSHH NHDPPQKVNC TGEAGIHVIA 180 PANGSDSSVA PIGATADSAP STSSKDSIQE KXSVPDPIQK DSSDSDDNAE TNIKQEREDE 240 PEPSKRLKKT VASCSAPLLK PGKKPKIVVH AASDVGISAD GYRWRKYGQK MVKGNPHPRN 300 YYRCTSAGCP VRKHIERAKD NTNAVIITYK GVHDHDMPVP KKRHGPPSAP LVAAAAPASM 360 STVQVVKSET IQNQVSATQW SVDKEGGLKG QTLECGGEKN VESARTLLSI GFEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MQRLEPAEEL KDQVGMSYQE EFRIIADQAV PDQTQNQQEP PNGPRSSEPS PTSVTQPISS  60
VPSPTLPEQK MSPGDNRNTX HTSEADKKNS FDPKTLSVVS IQKTPSPDGY NWRKYGQKQV  120
KSPQGSRSYY RCTYSECCAK KIECSDDSNR VMEIVYRSHH NHDPPQKVNC TGEAGIHVIA  180
PANGSDSSVA PIGATADSAP STSSKDSIQE KXSVPDPIQK DSSDSDDNAE TNIKQEREDE  240
PEPSKRLKKT VASCSAPLLK PGKKPKIVVH AASDVGISAD GYRWRKYGQK MVKGNPHPRN  300
YYRCTSAGCP VRKHIERAKD NTNAVIITYK GVHDHDMPVP KKRHGPPSAP LVAAAAPASM  360
STVQVVKSET IQNQVSATQW SVDKEGGLKG QTLECGGEKN VESARTLLSI GFEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-113	WRKY family protein