PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027065267.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YA
Protein Properties Length: 286aa    MW: 31670.1 Da    PI: 7.1498
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027065267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.42e-32168224158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RR++Rak+e ekkl +k+rkpylheSRh+hAlrR+RgsgGrF
  XP_027065267.1 168 QEPVYVNAKQYHGILRRRESRAKAELEKKL-IKARKPYLHESRHQHALRRARGSGGRF 224
                     69****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MQPKPKRSDR IDVNLYNVPH STVCSDPWWS TMGYNSISTT MMRGSVSESS SLEQSMDGQS  60
QSDSRIHEED EDSAKQSESV VNQHPDGNYA QEDNNFQRIA SAIPPKSNES LTQPQQFELV  120
GHSIACASNP YPDPYFAGMV ATYGQPLVHP PLIDMHHARM PLPLEMTQEP VYVNAKQYHG  180
ILRRRESRAK AELEKKLIKA RKPYLHESRH QHALRRARGS GGRFAKKTDA NDSMGSCSSS  240
AISSHGSFER PNSSQEVTQD SVNGAGGYLP GQLCGNVPSK QVDSMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-44NF-YA family protein