PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027065267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 286aa MW: 31670.1 Da PI: 7.1498 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.4 | 2e-32 | 168 | 224 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RR++Rak+e ekkl +k+rkpylheSRh+hAlrR+RgsgGrF XP_027065267.1 168 QEPVYVNAKQYHGILRRRESRAKAELEKKL-IKARKPYLHESRHQHALRRARGSGGRF 224 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MQPKPKRSDR IDVNLYNVPH STVCSDPWWS TMGYNSISTT MMRGSVSESS SLEQSMDGQS 60 QSDSRIHEED EDSAKQSESV VNQHPDGNYA QEDNNFQRIA SAIPPKSNES LTQPQQFELV 120 GHSIACASNP YPDPYFAGMV ATYGQPLVHP PLIDMHHARM PLPLEMTQEP VYVNAKQYHG 180 ILRRRESRAK AELEKKLIKA RKPYLHESRH QHALRRARGS GGRFAKKTDA NDSMGSCSSS 240 AISSHGSFER PNSSQEVTQD SVNGAGGYLP GQLCGNVPSK QVDSMP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 3e-44 | NF-YA family protein |