PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027065103.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 267aa    MW: 28285.1 Da    PI: 4.555
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027065103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919e-2973130359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers  dp+ + +tY+ eHnh+
  XP_027065103.1  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSCLDPTKLLVTYSCEHNHP 130
                     99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MVQKNPLDHD QQEDSTSTPE NVADDSAFSG DEAYEVTAPS PKKRKGAQKK VITVPIGEGD  60
GSRSKGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSCLDPTKLL  120
VTYSCEHNHP IPTTTSAVAA AATPSATTTS TSTSTSSAAT DSAPVKSAAE DEYGVFANRP  180
GLESDDNSGS SFNELAGELG WFSNVGSTMM DSPSLVGPAW VDADVALMLP IGEEDQLLFG  240
DLGELPECSV VFRRRGLEGT TCCAGSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-62WRKY family protein