PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027064982.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 586aa    MW: 65291.7 Da    PI: 6.3123
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027064982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4256e-1302165851373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ecA+a+ +++le+ ++l+++ +  +s +g+p+qRl ay++e+L ar   s++++y++l+++e +    ++ l+++++++e++P+lkf++
  XP_027064982.1 216 LKQLLMECARAFYENELENFEKLVETARGAVSITGEPIQRLGAYMLEGLIARKEASGTNIYRTLRCKEPE---GKDLLSYMHILYEICPYLKFGY 307
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+Hi+Df+i qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + e l ++g+rLa + e++++p+ef++ v     +
  XP_027064982.1 308 MAANGAIAEACRNEDRIHIVDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDDPVSQyaRGEGLAAVGKRLAAISEKFNIPVEFHA-VPVFAPE 401
                     *******************************************************999999**************************.6888999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L ++pgEalaVn+ lqlh+++desv+++++rd +L++vk l+Pkvv++veqe+++n+++Fl rf e+leyysa+f+s+++++pr+ +eri
  XP_027064982.1 402 VTRDMLCIRPGEALAVNFPLQLHHTPDESVDVTNPRDGLLRMVKALNPKVVTLVEQESKTNTAPFLPRFWETLEYYSAIFESIDVTMPRDRKERI 496
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r+ivn++aceg+er+erhe ++kW++r+++aGF+++pls+++++ ++ llr ++ + y++ e +g+++lgWkdr+L+s+SaW
  XP_027064982.1 497 NVEQHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFRQYPLSSYVNSVIRGLLRCYS-EHYTLVEADGAMLLGWKDRNLISASAW 585
                     **********************************************************9999.66************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MDSHQFFGYS VAGADISSYP SYSTAPSVPN RLYGSLKFEL RNSPNSPFLS HFDSETLTTL  60
SDGQEQHSST ENLSEASPSC NSSLNYTSSC YQQLSSSPDS SQEKPQISSG GTTLFQNPNN  120
GHNIKYTLQQ LETALMGPDE EATTSAPSVG ENKGPQASGQ KSRALSQENQ PLGSQIIHSQ  180
PSYALHLRKS GNELPMEKRL RAIEELSLKG IPPTNLKQLL MECARAFYEN ELENFEKLVE  240
TARGAVSITG EPIQRLGAYM LEGLIARKEA SGTNIYRTLR CKEPEGKDLL SYMHILYEIC  300
PYLKFGYMAA NGAIAEACRN EDRIHIVDFQ IAQGTQWMTL LQALAARPSG APHVRITGID  360
DPVSQYARGE GLAAVGKRLA AISEKFNIPV EFHAVPVFAP EVTRDMLCIR PGEALAVNFP  420
LQLHHTPDES VDVTNPRDGL LRMVKALNPK VVTLVEQESK TNTAPFLPRF WETLEYYSAI  480
FESIDVTMPR DRKERINVEQ HCLARDIVNI IACEGKERVE RHELFGKWKS RFTMAGFRQY  540
PLSSYVNSVI RGLLRCYSEH YTLVEADGAM LLGWKDRNLI SASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-176GRAS family protein