PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027064455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 256aa MW: 28605 Da PI: 6.8476 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 121.6 | 3.3e-38 | 51 | 141 | 7 | 97 |
NF-YB 7 flPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 ++Pi+n+ rimk++lP nak+s++ k t+qec se+i f+t+e +++c+ e+rkti+++dll+a a lGf +yv pl+++l++yr+ e++k XP_027064455.1 51 LVPITNILRIMKHILPPNAKVSEEVKTTIQECLSEYIHFITGEVNERCHCEQRKTITAEDLLYAYARLGFSNYVGPLTLFLERYRQNEAAK 141 58***********************************************************************************999765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MTKIYGFNVN FSFSDSRTRR CCNPSASGSN VNNNNNSGTP EPYPRLHPGY LVPITNILRI 60 MKHILPPNAK VSEEVKTTIQ ECLSEYIHFI TGEVNERCHC EQRKTITAED LLYAYARLGF 120 SNYVGPLTLF LERYRQNEAA KNIIHGDASV RRTTYFPDAQ GPPPLLTSTP PLLPLMNLTF 180 QVGEDHQGFF INPALMLNDL YFQNVRETDH GDRFDVVGSS SNPDFPALAP FSYGFHTGAS 240 SPPGSYTYGH GPNHGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 3e-38 | NF-YB family protein |