PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027064147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 494aa MW: 54656.7 Da PI: 6.9219 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51 | 2.5e-16 | 346 | 392 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+ellPk+ K +Ka++L +A+eY+ksLq XP_027064147.1 346 VHNLSERRRRDRINEKMRALQELLPKS-----NKTDKASMLDEAIEYMKSLQ 392 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MNPCFPDWNF GVEFPEPILK NKPLGMDNEL VELLWENGQI VLHPQSHHHH HPKPGTADQQ 60 ENQSRQVDKH NHDQSVSRGS TGGGSCQNQV TSLIQDTETV SWIDDPFDKE FTSDFLSEFP 120 ISNPVEQGPH EDDKFKKFGI SQDLHNHPVQ LPNDKPSDVI NSLPPGFHNF DSAQPNHSHL 180 PRAANAPLSA KADLRSSSDG VSNRTLGGEA REYSSAKTVG TSHCGSNLVV NDTDTSRVSS 240 GGIANHRGFS GAMAKDHRVG KMSSQSDGLQ TDQTEETAIT SSSSDGSETS FGRTCNQSTG 300 TNSHKRKSRD AEDSECQSKA AELESAARKK PAVKSGSSRK SRAAEVHNLS ERRRRDRINE 360 KMRALQELLP KSNKTDKASM LDEAIEYMKS LQLQLQMMWM GSGMAPMMFP GVQHYMPRLG 420 MGIGPLAMPS IHSQMHLPRL PLLDQATIPN QAALCHQTTM FNPMNYHAQL QNSKLSEQYA 480 NYMAFTLCRM HHSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 351 | 356 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 2e-43 | bHLH family protein |