PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063771.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 634aa MW: 68575.9 Da PI: 6.5087

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99	3e-31	278	335	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers +++++ei+Y+g+H+h+k XP_027063771.1 278 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 335 8**************************************.*************85 PP
2	WRKY	107.1	8.6e-34	450	508	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct+agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_027063771.1 450 LDDGYRWRKYGQKVVRGNPNPRSYYKCTHAGCPVRKHVERASHDPKAVITTYEGKHNHD 508 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MEEASSLQSR YHSPHAFEQL HQQQVEEQQS GACSNVEMDG RLTSSLQRVR DGNGNGNGNY 60 SEAAAAYHHS AAAAGGGGAK YKLMSPAKLP ISRSPCTLTI PPGLSPTSFL ESPVLLSNIK 120 AEPSPTTGTF SMPQMMQGSS GTSGFSYLTN CSSLNTVNKT NSCNFEFQFH ADSGDAAGLR 180 PIGLAVSSGL VQQHNKSLGQ VPDSGLSQSL VSSSLVKHEV VMAKESNFSA PTTISDCATT 240 AVDSDVLNQK NHPNISNQVS NSDSKDTTSS VANDRSSDDG YNWRKYGQKL VKGSEFPRSY 300 YKCTYPNCEV KKIFERSPEG QITEIVYKGS HDHPKPQPSR RFTPGALLSI QEEKFDKDST 360 FTGQEDKLNV NSQNTSVEPN STPVPSPQQE NDDGLDGTLS KLQCVNDEID EDDPFSKRRK 420 LDGSLDVTPV VKPIREPRVV VQTVSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTHAG 480 CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARTSSHEMA GPATMGAMSR IRSEEDDPLS 540 LDLGVGISYG AEHRPDAQLQ MLNSEPLQSQ VRAAASTRMV VQASTLPACY GVVNGGITLY 600 GSKENLDEGG GFGTAPLRSS NQCPQNLGRI ILGP

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MEEASSLQSR YHSPHAFEQL HQQQVEEQQS GACSNVEMDG RLTSSLQRVR DGNGNGNGNY  60
SEAAAAYHHS AAAAGGGGAK YKLMSPAKLP ISRSPCTLTI PPGLSPTSFL ESPVLLSNIK  120
AEPSPTTGTF SMPQMMQGSS GTSGFSYLTN CSSLNTVNKT NSCNFEFQFH ADSGDAAGLR  180
PIGLAVSSGL VQQHNKSLGQ VPDSGLSQSL VSSSLVKHEV VMAKESNFSA PTTISDCATT  240
AVDSDVLNQK NHPNISNQVS NSDSKDTTSS VANDRSSDDG YNWRKYGQKL VKGSEFPRSY  300
YKCTYPNCEV KKIFERSPEG QITEIVYKGS HDHPKPQPSR RFTPGALLSI QEEKFDKDST  360
FTGQEDKLNV NSQNTSVEPN STPVPSPQQE NDDGLDGTLS KLQCVNDEID EDDPFSKRRK  420
LDGSLDVTPV VKPIREPRVV VQTVSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTHAG  480
CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARTSSHEMA GPATMGAMSR IRSEEDDPLS  540
LDLGVGISYG AEHRPDAQLQ MLNSEPLQSQ VRAAASTRMV VQASTLPACY GVVNGGITLY  600
GSKENLDEGG GFGTAPLRSS NQCPQNLGRI ILGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-158	WRKY family protein