PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063494.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 377aa MW: 40434.1 Da PI: 8.0483

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.6	1.8e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl+h+kSHLQk+Rl XP_027063494.1 1 MRVMGVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDAS TLELQRSSSA SSSGMIGRSM 60 NDNVRITDAI RMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ TLAGENMASA 120 AAAGSYNKGG NQAGGGVVDI KEFGPPLSFP SLQDLNIYGS GEQLELQQGG MVVDRSPSLD 180 GFMSNNNDTQ LCHLGKKRPT PPSPYGGGSG KSPAAAASLM WSDHHHHHHD LRLQELGSAA 240 ASCLGNSQDH HHHHDAFKGD HHHQIQMNNA PSGAGVLSLE RSNVDVVIDS LSDSTCSNMY 300 ETKPLISGSC GADGGMVLGG TDQKNASSKL ERPSPRRAST TATTPPPSSS SDHRMNAVQI 360 GTAAAGAMSQ ARNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDAS TLELQRSSSA SSSGMIGRSM  60
NDNVRITDAI RMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ TLAGENMASA  120
AAAGSYNKGG NQAGGGVVDI KEFGPPLSFP SLQDLNIYGS GEQLELQQGG MVVDRSPSLD  180
GFMSNNNDTQ LCHLGKKRPT PPSPYGGGSG KSPAAAASLM WSDHHHHHHD LRLQELGSAA  240
ASCLGNSQDH HHHHDAFKGD HHHQIQMNNA PSGAGVLSLE RSNVDVVIDS LSDSTCSNMY  300
ETKPLISGSC GADGGMVLGG TDQKNASSKL ERPSPRRAST TATTPPPSSS SDHRMNAVQI  360
GTAAAGAMSQ ARNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	5e-48	G2-like family protein