PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063493.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 380aa MW: 40776.5 Da PI: 8.0483

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.6	1.8e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl+h+kSHLQk+Rl XP_027063493.1 1 MRVMGVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDGE RASTLELQRS SSASSSGMIG 60 RSMNDNVRIT DAIRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK ACQTLAGENM 120 ASAAAAGSYN KGGNQAGGGV VDIKEFGPPL SFPSLQDLNI YGSGEQLELQ QGGMVVDRSP 180 SLDGFMSNNN DTQLCHLGKK RPTPPSPYGG GSGKSPAAAA SLMWSDHHHH HHDLRLQELG 240 SAAASCLGNS QDHHHHHDAF KGDHHHQIQM NNAPSGAGVL SLERSNVDVV IDSLSDSTCS 300 NMYETKPLIS GSCGADGGMV LGGTDQKNAS SKLERPSPRR ASTTATTPPP SSSSDHRMNA 360 VQIGTAAAGA MSQARNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDGE RASTLELQRS SSASSSGMIG  60
RSMNDNVRIT DAIRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK ACQTLAGENM  120
ASAAAAGSYN KGGNQAGGGV VDIKEFGPPL SFPSLQDLNI YGSGEQLELQ QGGMVVDRSP  180
SLDGFMSNNN DTQLCHLGKK RPTPPSPYGG GSGKSPAAAA SLMWSDHHHH HHDLRLQELG  240
SAAASCLGNS QDHHHHHDAF KGDHHHQIQM NNAPSGAGVL SLERSNVDVV IDSLSDSTCS  300
NMYETKPLIS GSCGADGGMV LGGTDQKNAS SKLERPSPRR ASTTATTPPP SSSSDHRMNA  360
VQIGTAAAGA MSQARNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	1e-51	G2-like family protein