PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063491.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 436aa MW: 46949.6 Da PI: 8.2147

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_027063491.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.1	8.3e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_027063491.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MFHTKKPASA MNSHERPMSC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSDHP IKDGERASTL ELQRSSSASS 120 SGMIGRSMNE MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QTILEKACQT LAGENMASAA 180 AAGSYNKGGN QAGGGVVDIK EFGPPLSFPS LQDLNIYGSG EQLELQQGGM VVDRSPSLDG 240 FMSNNNDTQL CHLGKKRPTP PSPYGGGSGK SPAAAASLMW SDHHHHHHDL RLQELGSAAA 300 SCLGNSQDHH HHHDAFKGDH HHQIQMNNAP SGAGVLSLER SNVDVVIDSL SDSTCSNMYE 360 TKPLISGSCG ADGGMVLGGT DQKNASSKLE RPSPRRASTT ATTPPPSSSS DHRMNAVQIG 420 TAAAGAMSQA RNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MFHTKKPASA MNSHERPMSC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSDHP IKDGERASTL ELQRSSSASS  120
SGMIGRSMNE MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QTILEKACQT LAGENMASAA  180
AAGSYNKGGN QAGGGVVDIK EFGPPLSFPS LQDLNIYGSG EQLELQQGGM VVDRSPSLDG  240
FMSNNNDTQL CHLGKKRPTP PSPYGGGSGK SPAAAASLMW SDHHHHHHDL RLQELGSAAA  300
SCLGNSQDHH HHHDAFKGDH HHQIQMNNAP SGAGVLSLER SNVDVVIDSL SDSTCSNMYE  360
TKPLISGSCG ADGGMVLGGT DQKNASSKLE RPSPRRASTT ATTPPPSSSS DHRMNAVQIG  420
TAAAGAMSQA RNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	5e-98	G2-like family protein