PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SBP | ||||||||
Protein Properties | Length: 232aa MW: 25804.3 Da PI: 6.3247 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 130.1 | 8.3e-41 | 112 | 186 | 2 | 76 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 C++e+C+adl++ k+yh+rhkvCe h+ka+vv+v+gl+qrfCqqCsrfh+lsefDe+krsCrrrLa+hnerrrk+ XP_027063464.1 112 CRAENCKADLTDSKSYHKRHKVCEYHAKAEVVVVEGLKQRFCQQCSRFHDLSEFDEAKRSCRRRLAGHNERRRKH 186 9************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEPHMHHLRQ SSSAVHSPFA PTKKVTEEAE TDTEEEEEEE EEEVDEEEEE EEDGNGGFGA 60 EIEVEPGLKK KRMNFDEGPR KRGSRTAAAA AEGAGGGGGG GGGVAVAPPP GCRAENCKAD 120 LTDSKSYHKR HKVCEYHAKA EVVVVEGLKQ RFCQQCSRFH DLSEFDEAKR SCRRRLAGHN 180 ERRRKHFTES RGEGSGRRGS NPGTKKDQCR QVDERGRTPI VLPENHQKLH IH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 2e-36 | SBP family protein |